STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIP5K8-2Phosphatidylinositol 4-phosphate 5-kinase 8. (85 aa)    
Predicted Functional Partners:
SEC61G2
Protein transport protein Sec61 subunit gamma-2.
   
 
 0.650
SEC61G2-2
Protein transport protein Sec61 subunit gamma-2.
   
 
 0.650
PI4KALPHA1
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
   
 0.513
PI4KBETA1
Phosphatidylinositol 4-kinase beta 1; Belongs to the PI3/PI4-kinase family.
   
 0.501
PI4KBETA1-2
Phosphatidylinositol 4-kinase beta 1.
   
 0.501
PARV12.8
Peptidyl-prolyl cis-trans isomerase.
     
 0.414
PIN1
Peptidyl-prolyl cis-trans isomerase.
     
 0.414
PARV12.8-2
Peptidyl-prolyl cis-trans isomerase.
     
 0.414
PLC6
Phosphoinositide phospholipase C.
    
 0.400
PLC4
Phosphoinositide phospholipase C.
    
 0.400
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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