STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
3MAT-6Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase. (453 aa)    
Predicted Functional Partners:
5GT
Cyanidin 3-O-rutinoside 5-O-glucosyltransferase.
   
  
 0.575
5GT-2
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
  
 0.575
5GT-3
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
  
 0.575
5GT-4
Cyanidin 3-O-rutinoside 5-O-glucosyltransferase.
   
  
 0.575
5GT-5
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
  
 0.575
5GT-6
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
  
 0.575
5GT-7
Cyanidin 3-O-rutinoside 5-O-glucosyltransferase.
   
  
 0.575
MYB5
Transcription repressor MYB5.
   
  
 0.521
MYB5-2
Transcription repressor MYB5.
   
  
 0.521
MYB5-3
Transcription repressor MYB5.
   
  
 0.521
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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