STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_0414SyrP-like protein. (342 aa)    
Predicted Functional Partners:
UO65_0413
Putative non-ribosomal peptide synthetase.
 
    0.980
UO65_1871
Non-ribosomal peptide synthetase.
 
 0.965
UO65_0808
Hypothetical protein; FIG01294969.
  
 0.938
UO65_0799
Hypothetical protein; FIG01294969.
    0.920
UO65_3357
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.917
UO65_3363
Putative non-ribosomal peptide synthetase.
 
    0.904
UO65_0528
Non-ribosomal peptide synthetase.
 
 0.890
UO65_0970
Non-ribosomal peptide synthase.
  
 0.888
UO65_0415
Putative thioesterase.
 
   
 0.878
UO65_1872
Non-ribosomal peptide synthetase.
 
 
 0.878
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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