STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_0828Hypothetical protein; FIG137478. (245 aa)    
Predicted Functional Partners:
UO65_0827
Phosphoglycerate mutase family; FIG006762.
  
  
 0.974
UO65_0830
L-threonine 3-O-phosphate decarboxylase.
     
 0.900
UO65_0829
Hypothetical protein YbgI; FIG137478.
  
  
 0.880
UO65_6549
Putative DeoR-family transcriptional regulator; FIG005453.
  
     0.678
UO65_0036
Putative regulator of the mannose operon, ManO.
 
     0.656
UO65_3259
Putative two-component system response regulator.
  
     0.637
UO65_3293
Regulator of polyketide synthase expression.
  
     0.608
UO65_0831
Hypothetical protein.
       0.601
UO65_3261
Putative cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
   
 0.601
UO65_3047
Hemoprotein HemQ, essential component of heme biosynthetic pathway in Gram-positive bacteria.
  
   
 0.583
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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