STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_3236Putative (R)-specific enoyl-CoA hydratase. (285 aa)    
Predicted Functional Partners:
UO65_5333
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  0.963
UO65_0300
Acetoacetyl-CoA reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.912
UO65_1362
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
  0.912
UO65_3386
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
  0.912
UO65_5093
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
  0.912
UO65_6356
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
  0.912
UO65_3235
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
 
 0.882
UO65_0868
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
  0.876
UO65_4692
Malonyl CoA-acyl carrier protein transacylase.
  
 0.843
UO65_0407
Methylaspartate mutase, E subunit.
  
 0.798
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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