STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_6476Putative rhamnulose-1-phosphate aldolase; Putative lactaldehyde dehydrogenase. (679 aa)    
Predicted Functional Partners:
UO65_6474
Rhamnulokinase.
 
 0.992
UO65_6477
L-rhamnose isomerase.
 
  
  0.978
UO65_6475
Putative L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
  0.919
UO65_0800
Polyketide synthase.
  
 0.901
UO65_1871
Non-ribosomal peptide synthetase.
  
 0.901
UO65_6472
Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF.
   
   0.820
UO65_6473
Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE.
    
  0.817
UO65_6471
Putative L-lactate dehydrogenase, hypothetical protein subunit YkgG.
       0.806
UO65_4692
Malonyl CoA-acyl carrier protein transacylase.
  
 0.804
UO65_5313
Malonyl CoA-acyl carrier protein transacylase.
  
 0.804
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.