STRINGSTRING
fis protein (Ewingella americana) - STRING interaction network
"fis" - DNA-binding protein Fis in Ewingella americana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
fisDNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters (98 aa)    
Predicted Functional Partners:
dusB
tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family (321 aa)
   
  0.994
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (142 aa)
     
        0.685
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (329 aa)
   
      0.675
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)
   
        0.662
typA
Protein involved in GTP binding, GTPase activity, translation and response to stress (607 aa)
     
   
  0.658
priB
Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS) (105 aa)
   
        0.643
rpmH
50S ribosomal protein L34; Protein involved in structural constituent of ribosome and translation; Belongs to the bacterial ribosomal protein bL34 family (46 aa)
     
        0.590
rpsI
30S ribosomal protein S9; Protein involved in structural constituent of ribosome and translation; Belongs to the universal ribosomal protein uS9 family (130 aa)
     
        0.578
csrA
Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (61 aa)
   
     
  0.571
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (89 aa)
     
        0.553
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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