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GEAM_0114 protein (Ewingella americana) - STRING interaction network
"GEAM_0114" - LysR family transcriptional regulator in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_0114LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (287 aa)    
Predicted Functional Partners:
GEAM_0113
annotation not available (234 aa)
 
 
 
  0.835
GEAM_3477
annotation not available (231 aa)
     
 
  0.694
GEAM_3195
YgiD family protein; Protein involved in oxidoreductase activity, ferrous iron binding and cellular aromatic compound metabolic process (262 aa)
         
  0.550
GEAM_2926
annotation not available (129 aa)
   
          0.471
GEAM_3701
Galactoside O-acetyltransferase; Protein involved in N-acetyltransferase activity (310 aa)
   
          0.450
viaA
Protein involved in protein binding (489 aa)
   
     
  0.435
GEAM_3457
annotation not available (290 aa)
     
      0.408
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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