STRINGSTRING
GEAM_0206 protein (Ewingella americana) - STRING interaction network
"GEAM_0206" - Right origin-binding protein in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_0206Right origin-binding protein; Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated (288 aa)    
Predicted Functional Partners:
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family (726 aa)
     
    0.811
fadJ
Fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; In the central section; belongs to the 3-hydroxyacyl- CoA dehydrogenase family (716 aa)
     
    0.811
GEAM_2901
annotation not available (59 aa)
   
          0.563
GEAM_2860
Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated (295 aa)
 
 
 
0.541
GEAM_1902
AraC family transcriptional regulator; Protein involved in sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, DNA binding and regulation of transcription, DNA-templated (284 aa)
 
 
 
  0.525
GEAM_3962
Putative membrane protein; Protein involved in biological_process (110 aa)
   
          0.521
GEAM_0207
annotation not available (158 aa)
              0.518
GEAM_0307
annotation not available (115 aa)
   
          0.499
GEAM_3856
Putative inner membrane protein; Protein involved in biological_process (92 aa)
   
          0.484
GEAM_1707
annotation not available (321 aa)
   
          0.483
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
Server load: low (15%) [HD]