STRINGSTRING
csrA protein (Ewingella americana) - STRING interaction network
"csrA" - Carbon storage regulator homolog in Ewingella americana
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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csrACarbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (61 aa)    
Predicted Functional Partners:
GEAM_1507
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (374 aa)
 
 
 
  0.835
GEAM_1408
Signal transduction histidine kinase; Protein involved in signal transducer activity, phosphorelay sensor kinase activity, protein histidine kinase activity, ATP binding, signal transduction, chemotaxis and phosphorelay signal transduction system (675 aa)
     
 
  0.765
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (103 aa)
     
 
  0.670
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (419 aa)
       
 
  0.638
GEAM_0096
Aerobic respiration control sensor protein; Protein involved in phosphorelay sensor kinase activity, phosphorelay response regulator activity, signal transducer activity, ATP binding, signal transduction, regulation of transcription, DNA-templated and phosphorelay signal transduction system (779 aa)
         
  0.636
dksA
RNA polymerase-binding transcription factor DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression (120 aa)
   
   
  0.611
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (277 aa)
         
  0.603
flgL
FlgL family flagellar hook-associated protein; Protein involved in structural molecule activity and ciliary or bacterial-type flagellar motility (320 aa)
     
 
  0.601
rsmF
Ribosomal RNA small subunit methyltransferase F; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA (482 aa)
           
  0.601
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (875 aa)
              0.598
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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