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GEAM_0554 protein (Ewingella americana) - STRING interaction network
"GEAM_0554" - TetR family transcriptional regulator in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_0554TetR family transcriptional regulator; Protein involved in DNA binding (197 aa)    
Predicted Functional Partners:
GEAM_1154
Cytochrome b561; Protein involved in biological_process and respiratory electron transport chain (185 aa)
            0.764
GEAM_0549
Protein involved in biological_process (191 aa)
 
          0.747
GEAM_0553
annotation not available (230 aa)
              0.576
GEAM_4221
Uncharacterized protein; FIG00985911 (261 aa)
   
          0.486
GEAM_4178
annotation not available (328 aa)
   
          0.465
GEAM_1287
TetR family transcriptional regulator; Protein involved in DNA binding (193 aa)
   
          0.462
GEAM_1897
annotation not available (350 aa)
   
          0.461
GEAM_3247
Short-chain alcohol dehydrogenase family protein; Protein involved in oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family (302 aa)
   
          0.457
GEAM_3128
annotation not available (252 aa)
   
          0.428
GEAM_0552
annotation not available (310 aa)
              0.411
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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