Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Protein involved in biological_process (179 aa)
Predicted Functional Partners:
3-oxoacyl-[acyl-carrier protein] reductase; Protein involved in oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family (278 aa)
Short-chain dehydrogenase/reductase family oxidoreductase; Protein involved in oxidoreductase activity and metabolic process; Belongs to the short-chain dehydrogenases/reductases (SDR) family (244 aa)
Cytosine/purine/uracil/thiamine/allantoin permease family protein; Protein involved in nucleobase transmembrane transporter activity, biological_process and nucleobase transport (439 aa)
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (272 aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit A; Protein involved in carbon-nitrogen ligase activity, with glutamine as amido-N-donor (478 aa)
Your Current Organism:
NCBI taxonomy Id: 910964 Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852