STRINGSTRING
pal protein (Ewingella americana) - STRING interaction network
"pal" - annotation not available in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palannotation not available (169 aa)    
Predicted Functional Partners:
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (413 aa)
 
  0.998
ygbF
Cell division coordinator CpoB; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division (260 aa)
 
 
  0.974
tolQ
MotA/TolQ/ExbB family proton channel protein; Protein involved in protein transporter activity, pathogenesis, proton transport, transport and protein transport (229 aa)
 
 
  0.919
tolR
TolR family component of Tol biopolymer transport system; Protein involved in transporter activity, proton transport, (DEPRECATED) cellular membrane organization, transport and protein transport (142 aa)
 
 
  0.900
lolA
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (203 aa)
 
 
  0.892
yaeT
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery (808 aa)
   
 
  0.875
GEAM_1075
annotation not available (359 aa)
   
 
  0.868
nuoD
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family (599 aa)
     
 
  0.842
lolE
Lipoprotein releasing system transmembrane protein; Protein involved in lipoprotein transporter activity, biological_process, lipoprotein transport and transport (416 aa)
   
 
  0.841
GEAM_2190
Lipoprotein releasing system transmembrane protein; Protein involved in lipoprotein transporter activity and lipoprotein transport (400 aa)
   
 
  0.832
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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