STRINGSTRING
GEAM_0903 protein (Ewingella americana) - STRING interaction network
"GEAM_0903" - Protein involved in porin activity and transport in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_0903Protein involved in porin activity and transport (366 aa)    
Predicted Functional Partners:
GEAM_1075
annotation not available (359 aa)
   
  0.905
GEAM_1707
annotation not available (321 aa)
   
 
      0.745
yaeT
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery (808 aa)
   
 
 
  0.745
GEAM_2199
YcfM family salvage pathway lipoprotein; Overlaps another CDS with the same product name (122 aa)
   
          0.704
hspQ
Heat shock protein HspQ; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress (105 aa)
   
          0.699
GEAM_1967
UPF0259 membrane protein GEAM_1967; Protein involved in biological_process (250 aa)
   
          0.652
bamC
Outer membrane protein assembly factor BamC; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (356 aa)
   
          0.643
GEAM_3973
Potassium efflux system protein/small-conductance mechanosensitive channel; Protein involved in biological_process and transmembrane transport (1120 aa)
   
          0.634
GEAM_2913
Outer membrane protein H; Protein involved in unfolded protein binding; Belongs to the skp family (165 aa)
   
 
 
  0.629
GEAM_0495
annotation not available (224 aa)
   
          0.626
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
Server load: low (23%) [HD]