STRINGSTRING
rmf protein (Ewingella americana) - STRING interaction network
"rmf" - Ribosome modulation factor in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmfRibosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes) (55 aa)    
Predicted Functional Partners:
rlmL
Ribosomal RNA large subunit methyltransferase K/L; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA; Belongs to the methyltransferase superfamily. RlmKL family (706 aa)
              0.608
GEAM_1761
annotation not available (90 aa)
   
          0.471
GEAM_1070
Putative lipoprotein; Protein involved in biological_process (192 aa)
              0.425
GEAM_1069
annotation not available (552 aa)
              0.425
GEAM_1068
Protein involved in biological_process (403 aa)
              0.425
GEAM_0070
Ribosome hibernation protein; Protein involved in primary metabolic process (95 aa)
     
   
  0.424
GEAM_1067
ATPase component of an ABC superfamily transporter; COG0488; Protein involved in ATPase activity, ATP binding, nucleotide binding and nucleoside-triphosphatase activity (634 aa)
              0.408
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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