STRINGSTRING
GEAM_1282 protein (Ewingella americana) - STRING interaction network
"GEAM_1282" - LysR family transcriptional regulator in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_1282LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (306 aa)    
Predicted Functional Partners:
GEAM_1283
Protein involved in hydrolase activity and metabolic process (309 aa)
              0.589
GEAM_1101
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (293 aa)
   
          0.518
GEAM_3874
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (303 aa)
   
          0.515
GEAM_1641
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (297 aa)
   
          0.487
GEAM_1255
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (305 aa)
   
        0.480
GEAM_3514
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (305 aa)
   
          0.472
GEAM_1128
Nac family nitrogen assimilation regulatory protein; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (138 aa)
   
          0.471
GEAM_4331
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (284 aa)
   
          0.467
GEAM_3114
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (304 aa)
   
          0.463
GEAM_1614
LysR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity and regulation of transcription, DNA-templated (301 aa)
   
        0.451
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
Server load: low (9%) [HD]