STRINGSTRING
GEAM_1345 protein (Ewingella americana) - STRING interaction network
"GEAM_1345" - IclR family transcriptional regulator in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_1345IclR family transcriptional regulator; Protein involved in DNA binding and regulation of transcription, DNA-templated (264 aa)    
Predicted Functional Partners:
GEAM_1346
Short-chain fatty acids transporter; Protein involved in biological_process (470 aa)
              0.845
GEAM_1347
X-Pro dipeptidyl-peptidase; FIG00482872; Protein involved in dipeptidyl-peptidase activity, aminopeptidase activity, hydrolase activity, metabolic process and proteolysis (619 aa)
              0.792
GEAM_2108
IclR family regulatory protein; Protein involved in DNA binding and regulation of transcription, DNA-templated (250 aa)
   
          0.542
GEAM_0126
Altronate hydrolase; Protein involved in hydro-lyase activity (493 aa)
 
        0.492
GEAM_2328
Uxu operon transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, fatty-acyl-CoA binding, DNA binding, regulation of transcription, DNA-templated and regulation of fatty acid metabolic process (246 aa)
   
 
  0.484
GEAM_1725
GntR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, fatty-acyl-CoA binding, DNA binding, regulation of transcription, DNA-templated and regulation of fatty acid metabolic process (233 aa)
   
      0.468
GEAM_2162
Uncharacterized protein; FIG01220006 (81 aa)
       
      0.467
GEAM_0123
Hexuronate-utilization operon transcriptional repressor; Protein involved in sequence-specific DNA binding transcription factor activity, fatty-acyl-CoA binding, DNA binding, regulation of transcription, DNA-templated and regulation of fatty acid metabolic process (267 aa)
   
 
  0.440
GEAM_1575
FIG00613330; Protein involved in sequence-specific DNA binding transcription factor activity, fatty-acyl-CoA binding, DNA binding, regulation of transcription, DNA-templated and regulation of fatty acid metabolic process (228 aa)
   
      0.422
GEAM_3038
GntR family transcriptional regulator; Protein involved in sequence-specific DNA binding transcription factor activity, fatty-acyl-CoA binding, DNA binding, regulation of transcription, DNA-templated and regulation of fatty acid metabolic process (225 aa)
   
          0.421
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
Server load: low (11%) [HD]