Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Groups of genes that are frequently observed in each other's genomic neighborhood.
Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Putative inner membrane protein; Protein involved in biological_process (122 aa)
Predicted Functional Partners:
annotation not available (63 aa)
annotation not available (124 aa)
Protein involved in biological_process (241 aa)
Putative lipoprotein; Protein involved in biological_process (189 aa)
Protein involved in biological_process (37 aa)
SfmH family fimbriae-like adhesin protein; Protein involved in cell adhesion (367 aa)
annotation not available (87 aa)
Putative lipoprotein; Protein involved in biological_process (73 aa)
NlpE family lipoprotein; Protein involved in biological_process (225 aa)
Fumarate reductase subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane (119 aa)
Your Current Organism:
NCBI taxonomy Id: 910964 Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852