STRINGSTRING
GEAM_1949 protein (Ewingella americana) - STRING interaction network
"GEAM_1949" - annotation not available in Ewingella americana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEAM_1949annotation not available (83 aa)    
Predicted Functional Partners:
GEAM_2410
UPF0304 protein GEAM_2410; FIG00361523; Belongs to the UPF0304 family (164 aa)
   
          0.758
GEAM_2900
UPF0253 protein GEAM_2900; FIG00905232; Belongs to the UPF0253 family (66 aa)
   
        0.713
GEAM_3686
annotation not available (89 aa)
   
          0.691
GEAM_2196
annotation not available (180 aa)
   
          0.671
GEAM_0658
annotation not available (75 aa)
   
          0.669
GEAM_1004
annotation not available (577 aa)
   
          0.666
GEAM_0543
UPF0255 protein GEAM_0543; COG1073; Belongs to the UPF0255 family (415 aa)
   
          0.583
GEAM_0798
YbgE family protein; Protein involved in biological_process (74 aa)
   
          0.572
crl
Sigma factor-binding protein Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32 (121 aa)
   
          0.561
GEAM_4008
Uncharacterized protein; FIG00614015 (68 aa)
   
          0.546
Your Current Organism:
Ewingella americana
NCBI taxonomy Id: 910964
Other names: E. americana ATCC 33852, Ewingella americana, Ewingella americana ATCC 33852, Ewingella americana ATCC33852, Ewingella americana str. ATCC 33852, Ewingella americana strain ATCC 33852
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