STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD11PDZ domain containing 11. (112 aa)    
Predicted Functional Partners:
VDAC2
Voltage-dependent anion-selective channel protein 2.
   
 
 0.810
VDAC1
Voltage-dependent anion-selective channel protein 1.
   
 
  0.810
ADAM10
Disintegrin and metalloproteinase domain-containing protein 10.
     
 0.809
TSPAN33
Tetraspanin-33.
    
 0.809
PLEKHA7
Pleckstrin homology domain-containing family A member 7 isoform X6.
     
 0.736
C8B
Complement component C8 beta chain isoform X2.
    
  0.707
ATP7B
Copper-transporting ATPase 2 isoform X1.
    
 0.665
ATP7A
Copper-transporting ATPase 1.
    
 0.665
AFDN
Afadin, adherens junction formation factor.
     
 0.627
ENSSCAP00000000863
annotation not available
    
 0.605
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.