STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000002000annotation not available (58 aa)    
Predicted Functional Partners:
EIF4A2
Eukaryotic initiation factor 4A-II.
   
 0.460
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.449
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.428
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.413
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.408
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.408
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.404
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 0.400
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.400
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.