STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHA7Ephrin type-A receptor 7 isoform X1. (993 aa)    
Predicted Functional Partners:
EFNA5
Ephrin-A5 isoform X1.
   
 0.758
EFNA2
Ephrin-A2 isoform X1.
   
 0.731
EFNB2
LOW QUALITY PROTEIN: ephrin-B2.
   
 0.712
EFNB1
Ephrin-B1.
   
 0.707
ITSN2
Intersectin-2 isoform X1.
   
 0.672
ITSN1
Intersectin-1 isoform X1.
    
 0.583
NTNG1
Netrin G1.
    
 0.523
ROBO2-2
Roundabout, axon guidance receptor 2.
    
 0.472
ROBO2
Roundabout guidance receptor 2.
    
 0.472
SLIT2
Slit homolog 2 protein isoform X1.
    
 0.449
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.