STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBGT1Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group). (324 aa)    
Predicted Functional Partners:
PLPP5
Diacylglycerol diphosphate phosphatase / phosphatidate phosphatase.
    
 0.572
PCYT1B
Phosphate cytidylyltransferase 1, choline, beta.
   
  
 0.500
A4GALT
Lactosylceramide 4-alpha-galactosyltransferase-like isoform X1.
      
 0.490
ENSSCAP00000002502
annotation not available
    
 0.466
ENSSCAP00000023533
annotation not available
    
 0.466
PROCA1
Secretory phospholipase A2.
      
 0.460
PLPP4
Diacylglycerol diphosphate phosphatase / phosphatidate phosphatase.
    
 0.448
NEU2
Sialidase-2/3/4.
    
 0.425
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.