STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP35Nuclear pore complex protein Nup53. (325 aa)    
Predicted Functional Partners:
NUP155
Nuclear pore complex protein Nup155.
   
 0.999
NUP93
Nuclear pore complex protein Nup93 isoform X3.
   
 0.996
NUP205
Nuclear pore complex protein Nup205.
   
 0.991
RANBP2
RAN binding protein 2.
    
 0.989
NUP85
Nuclear pore complex protein Nup85.
   
 0.988
NUP43
Nucleoporin 43.
   
 0.988
NUP210
Nuclear pore membrane glycoprotein 210 isoform X1.
    
 0.986
NDC1
Nucleoporin NDC1 isoform X2.
    
 0.979
NUP54
Nuclear pore complex protein Nup54.
   
 0.978
NUP107
Nuclear pore complex protein Nup107.
   
 0.972
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.