STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf49Uncharacterized protein C5orf49 homolog. (138 aa)    
Predicted Functional Partners:
CUNH9orf116
LOW QUALITY PROTEIN: UPF0691 protein C9orf116 homolog.
    
 
 0.836
CFAP161
Cilia- and flagella-associated protein 161.
   
 
 0.609
ENKUR
Enkurin.
    
 
 0.605
NME7
Nucleoside diphosphate kinase 7.
    
 
 0.585
ARMC3
Armadillo repeat-containing protein 3.
   
  
 0.571
EFCAB1
EF-hand calcium-binding domain-containing protein 1.
    
 
 0.571
IFT57
Intraflagellar transport protein 57 homolog.
      
 0.551
CFAP77
Cilia- and flagella-associated protein 77.
   
   0.545
TEKT1
Tektin-1 isoform X1.
   
   0.543
EFHB
EF-hand domain-containing family member B.
   
   0.543
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.