STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC4RRNA N6-adenosine-methyltransferase ZCCHC4. (505 aa)    
Predicted Functional Partners:
AASDH
Beta-alanine-activating enzyme.
   
    0.745
METTL5
Methyltransferase-like protein 5 isoform X2.
      
 0.682
METTL14
N6-adenosine-methyltransferase non-catalytic subunit.
   
  
 0.648
METTL16
RNA N6-adenosine-methyltransferase METTL16.
   
  
 0.644
NOL6
Nucleolar protein 6.
   
    0.618
ZC3H13
Zinc finger CCCH domain-containing protein 13 isoform X1.
      
 0.589
MGA
MAX gene-associated protein isoform X1.
   
    0.586
MED22
Mediator of RNA polymerase II transcription subunit 22 isoform X1.
   
    0.586
PRPF38A
Pre-mRNA-splicing factor 38A.
   
    0.586
GPN3
GPN-loop GTPase 3.
   
    0.586
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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