STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XRCC6X-ray repair cross-complementing protein 6. (625 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross-complementing protein 5 isoform X1.
   
 0.999
WRN
Werner syndrome ATP-dependent helicase isoform X2.
   
 
 0.995
PRKDC
DNA-dependent protein kinase catalytic subunit isoform X1.
    
 0.991
LIG4
DNA ligase 4 isoform X1.
   
 0.990
MRE11
Double-strand break repair protein MRE11 isoform X1.
   
 0.976
DCLRE1C
DNA cross-link repair 1C protein.
   
 0.973
ATM
Serine-protein kinase ATM isoform X1.
    
 0.972
NHEJ1
Non-homologous end-joining factor 1 isoform X5.
    
 0.972
TP53BP1
Tumor suppressor p53-binding protein 1.
    
 0.960
RAD50
DNA repair protein RAD50.
   
 0.944
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.