STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A1Solute carrier family 30 (zinc transporter), member 1. (510 aa)    
Predicted Functional Partners:
CXCL12
Stromal cell-derived factor 1 isoform X1.
      
 0.685
SLC30A6
Solute carrier family 30 (zinc transporter), member 6.
    
 
 0.627
SLC30A9
Solute carrier family 30 (zinc transporter), member 9.
  
 
 0.568
SLC39A13
Solute carrier family 39 (zinc transporter), member 13.
   
 0.567
ENSSCAP00000000736
Solute carrier family 39 (zinc transporter), member 7.
  
 0.560
SLC39A12
Solute carrier family 39 (zinc transporter), member 12.
  
 0.552
SLC35B3
Solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3.
  
 
 0.530
GOLT1B
Vesicle transport protein GOT1B.
     
 0.527
SLC31A1
Solute carrier family 31 (copper transporter), member 1.
      
 0.527
SLC39A9
Solute carrier family 39 (zinc transporter), member 9.
   
 
 0.527
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.