STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP60524.1Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (343 aa)    
Predicted Functional Partners:
SDP60507.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.972
SDP60492.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-).
 
 0.968
SDP60471.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.947
SDO54341.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.908
SDO89026.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.908
SDP60451.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.897
SDP67472.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.895
SDP04957.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.893
SDO65534.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-).
 
 0.892
SDO65596.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.891
Your Current Organism:
Desulforhopalus singaporensis
NCBI taxonomy Id: 91360
Other names: D. singaporensis, DSM 12130, Desulforhopalus singaporensis Lie et al. 2000, strain Spore T1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.