STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX87332.1[M] COG1596 Periplasmic protein involved in polysaccharide export. (499 aa)    
Predicted Functional Partners:
EDX86125.1
Capsular exopolysaccharide family protein; [D] COG0489 ATPases involved in chromosome partitioning.
 
 0.998
EDX87685.1
Chain length determinant protein; [D] COG0489 ATPases involved in chromosome partitioning.
 
 0.996
EDX84334.1
Capsular exopolysaccharide family protein; [D] COG0489 ATPases involved in chromosome partitioning.
 
 0.994
EDX83651.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.958
EDX87579.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP subfamily; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.952
EDX86132.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.655
EDX85550.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.598
EDX83865.1
ABC transporter, ATP-binding protein; [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
  
 0.591
EDX87713.1
ABC transporter, ATP-binding protein; [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
  
 0.591
EDX85526.1
Conserved domain protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
 0.585
Your Current Organism:
Synechococcus sp. PCC7335
NCBI taxonomy Id: 91464
Other names: Coccusdissimilis mexicanus PCC 7335, S. sp. PCC 7335, Synechococcus PCC 7335, Synechococcus PCC7335, Synechococcus mexicanus PCC 7335, Synechococcus sp. PCC 7335
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