STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_02231Uncharacterized protein. (96 aa)    
Predicted Functional Partners:
PV08_02189
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.920
PV08_10096
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.872
PV08_00129
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.872
PV08_08416
Flavoprotein domain-containing protein.
  
 
 0.788
PV08_02679
FSH1 domain-containing protein.
     
 0.774
PV08_01498
Uncharacterized protein.
  
 
 0.769
PV08_11230
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.754
PV08_10309
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.754
PV08_05916
Tryptophan synthase.
     
 0.730
PV08_12046
Tryptophan synthase.
     
 0.730
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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