STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09281Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
PV08_09432
DUF1713 domain-containing protein.
  
 
   0.733
PV08_02875
Uncharacterized protein.
  
 
   0.678
PV08_06611
Ribosomal protein S18.
   
   0.629
PV08_02070
Uncharacterized protein.
   
   0.621
PV08_04371
Ribosomal protein L13.
   
   0.620
PV08_06238
Ribosomal_S7 domain-containing protein.
   
   0.619
PV08_09154
Uncharacterized protein.
    
   0.609
PV08_09300
Ribosomal protein L19.
    
   0.609
PV08_08053
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.609
PV08_08564
50S ribosomal protein L3.
    
   0.609
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.