STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09361AB hydrolase-1 domain-containing protein. (271 aa)    
Predicted Functional Partners:
PV08_07661
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
  
 0.660
PV08_07722
Translation initiation factor IF-2.
  
  
 0.602
PV08_05613
Translation initiation factor aIF-2.
  
  
 0.602
PV08_03819
Ribosomal_L23eN domain-containing protein.
   
    0.591
PV08_01957
Uncharacterized protein.
    
 0.590
PV08_01960
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
    
 0.590
PV08_02836
Ribosomal_L2_C domain-containing protein.
   
   0.588
PV08_04268
60S ribosomal protein L2-B.
   
   0.579
PV08_08564
50S ribosomal protein L3.
   
  
 0.570
PV08_06815
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
  
 0.570
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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