STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_03988BRO1 domain-containing protein. (1073 aa)    
Predicted Functional Partners:
PV08_10419
Uncharacterized protein.
    
 0.981
PV08_05258
Magnesium-dependent phosphatase-1.
    
 0.930
PV08_03989
Chaperone DnaJ.
 
      0.899
PV08_10265
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.876
PV08_07613
Uncharacterized protein.
   
 0.862
PIM1
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
 
      0.848
PV08_05544
BRO1 domain-containing protein.
     
0.839
PV08_00223
Polyubiquitin.
   
 
 0.817
PV08_00684
Uncharacterized protein.
    
 
 0.730
PV08_06048
Uncharacterized protein.
    
 
 0.724
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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