STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_02979GTP-binding protein ypt1. (213 aa)    
Predicted Functional Partners:
PV08_11386
Uncharacterized protein.
   
 0.996
PV08_05616
Rab-GAP TBC domain-containing protein.
    
 0.996
PV08_00174
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.995
PV08_01953
SEC7 domain-containing protein.
    
 0.991
PV08_04379
Uncharacterized protein.
 
 
 0.986
PV08_05532
Trafficking protein particle complex subunit BET3.
   
 0.985
PV08_00662
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.981
PV08_03947
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.980
PV08_07695
Uncharacterized protein.
    
 0.976
PV08_02084
Uncharacterized protein.
    
 0.976
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.