STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_10921Haloacid dehalogenase, type II. (263 aa)    
Predicted Functional Partners:
PV08_06996
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component.
   
 
 0.913
PV08_04722
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.883
PV08_07720
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
   
 
 0.875
PV08_01414
Citrate synthase; Belongs to the citrate synthase family.
  
 0.854
PV08_08677
Citrate synthase; Belongs to the citrate synthase family.
  
 0.854
PV08_10837
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.816
PV08_06647
Uncharacterized protein.
  
 0.816
PV08_11189
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.816
PV08_11222
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
  
 0.816
PV08_03052
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.816
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.