STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_01564Uncharacterized protein. (1823 aa)    
Predicted Functional Partners:
PV08_06657
CBF domain-containing protein.
   
 0.999
PV08_04136
Uncharacterized protein.
   
 0.999
PV08_04368
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.999
PV08_04977
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
PV08_01405
WD_REPEATS_REGION domain-containing protein.
   
 0.999
PV08_11404
WD_REPEATS_REGION domain-containing protein.
   
  0.999
PV08_10124
DRIM domain-containing protein.
  
 0.999
PV08_09454
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
PV08_09931
Sas10 domain-containing protein.
   
 0.999
PV08_05466
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.999
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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