STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_04460Interferon-induced protein with tetratricopeptide repeats 5. (477 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.872
USP18
Ubl carboxyl-terminal hydrolase 18.
   
 0.691
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
   
 
 0.679
IFIH1
Interferon-induced helicase C domain-containing protein 1.
   
 0.665
AS28_02962
Interferon-induced GTP-binding protein Mx; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.621
KIF25
Kinesin-like KIF25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.615
BBS9
Protein PTHB1.
    
 0.611
BBS7
Bardet-Biedl syndrome 7 protein.
    
 0.604
TTC8
Tetratricopeptide repeat protein 8.
    
 0.557
YWHAZ
14-3-3 protein zeta; Belongs to the 14-3-3 family.
    
 
 0.545
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.