STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS28_11010Uncharacterized protein. (111 aa)    
Predicted Functional Partners:
BRE
BRCA1-A complex subunit BRE.
    
 0.720
AS28_14162
Lys-63-specific deubiquitinase BRCC36.
    
 0.719
FAM175A
BRCA1-A complex subunit Abraxas.
    
 0.719
BRCA1
Breast cancer type 1 susceptibility protein.
    
 0.646
BARD1
BRCA1-associated RING domain protein 1.
    
 0.526
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
  0.495
UBB
Polyubiquitin.
    
  0.470
PAXIP1
PAX-interacting protein 1.
    
 0.461
RPL21
60S ribosomal protein L21.
   
   0.450
RPL8
60S ribosomal protein L8.
   
 
 0.417
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.