STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_10900Vacuolar protein sorting-associated protein 72. (290 aa)    
Predicted Functional Partners:
N300_10067
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.980
N300_08207
E1A-binding protein p400.
    
 0.979
N300_00787
DNA methyltransferase 1-associated protein 1.
    
 0.978
N300_02589
YEATS domain-containing protein 4.
    
 0.969
N300_15698
MRG/MORF4L-binding protein.
   
 0.965
N300_03657
Primary ciliary dyskinesia protein 1.
    
 
 0.958
N300_05557
Mortality factor 4-like 1.
    
 0.952
N300_03241
Actin-like 6A; Belongs to the actin family.
    
 0.951
N300_09655
Coiled-coil domain-containing protein 170.
    
 0.942
N300_06634
Actin-related protein 6; Belongs to the actin family.
    
 
 0.923
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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