STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_07366Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
N300_07367
Zinc finger SWIM domain-containing protein 6.
 
     0.944
N300_12136
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.520
N300_13622
Cullin-2; Belongs to the cullin family.
     
 0.429
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.