N300_10472 protein (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N300_10472

Putative helicase MOV-10. (921 aa)

Predicted Functional Partners:

N300_11725

0.768

N300_13682

0.714

N300_08217

0.712

N300_02198

0.670

N300_02665

0.602

N300_03359

0.576

N300_05506

0.549

N300_05505

0.549

N300_10849

0.541

N300_07784

0.541

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_02198	N300_03359	A0A091IDE1	A0A091HVG9	Tudor domain-containing protein 6.	Tudor domain-containing protein 12.	0.647
N300_02198	N300_05505	A0A091IDE1	A0A091J1P4	Tudor domain-containing protein 6.	Putative ATP-dependent RNA helicase DDX4; Belongs to the DEAD box helicase family.	0.571
N300_02198	N300_05506	A0A091IDE1	A0A091IBX2	Tudor domain-containing protein 6.	Interleukin-31 receptor subunit alpha.	0.571
N300_02198	N300_08217	A0A091IDE1	A0A091IGP9	Tudor domain-containing protein 6.	Piwi-like 1; Belongs to the argonaute family.	0.956
N300_02198	N300_10472	A0A091IDE1	A0A091HQ68	Tudor domain-containing protein 6.	Putative helicase MOV-10.	0.670
N300_02198	N300_10849	A0A091IDE1	A0A091IT98	Tudor domain-containing protein 6.	Uncharacterized protein.	0.561
N300_02198	N300_11725	A0A091IDE1	A0A091HSX2	Tudor domain-containing protein 6.	Piwi-like 2.	0.961
N300_02198	N300_13682	A0A091IDE1	A0A091IF06	Tudor domain-containing protein 6.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	0.739
N300_02665	N300_03359	A0A091I2G6	A0A091HVG9	Tudor domain-containing protein 5.	Tudor domain-containing protein 12.	0.593
N300_02665	N300_05505	A0A091I2G6	A0A091J1P4	Tudor domain-containing protein 5.	Putative ATP-dependent RNA helicase DDX4; Belongs to the DEAD box helicase family.	0.548
N300_02665	N300_05506	A0A091I2G6	A0A091IBX2	Tudor domain-containing protein 5.	Interleukin-31 receptor subunit alpha.	0.460
N300_02665	N300_08217	A0A091I2G6	A0A091IGP9	Tudor domain-containing protein 5.	Piwi-like 1; Belongs to the argonaute family.	0.816
N300_02665	N300_10472	A0A091I2G6	A0A091HQ68	Tudor domain-containing protein 5.	Putative helicase MOV-10.	0.602
N300_02665	N300_10849	A0A091I2G6	A0A091IT98	Tudor domain-containing protein 5.	Uncharacterized protein.	0.457
N300_02665	N300_11725	A0A091I2G6	A0A091HSX2	Tudor domain-containing protein 5.	Piwi-like 2.	0.813
N300_02665	N300_13682	A0A091I2G6	A0A091IF06	Tudor domain-containing protein 5.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	0.501
N300_03359	N300_02198	A0A091HVG9	A0A091IDE1	Tudor domain-containing protein 12.	Tudor domain-containing protein 6.	0.647
N300_03359	N300_02665	A0A091HVG9	A0A091I2G6	Tudor domain-containing protein 12.	Tudor domain-containing protein 5.	0.593
N300_03359	N300_05505	A0A091HVG9	A0A091J1P4	Tudor domain-containing protein 12.	Putative ATP-dependent RNA helicase DDX4; Belongs to the DEAD box helicase family.	0.596
N300_03359	N300_05506	A0A091HVG9	A0A091IBX2	Tudor domain-containing protein 12.	Interleukin-31 receptor subunit alpha.	0.596