STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_11423SERTA domain-containing protein 4. (288 aa)    
Predicted Functional Partners:
N300_07023
Adenylate kinase 9.
    
  0.862
N300_07022
Adenylate kinase 9.
    
  0.862
N300_00579
Protein unc-79.
    
 0.826
N300_12084
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform.
    
  0.687
N300_15098
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.683
N300_15099
E3 SUMO-protein ligase RanBP2.
    
 0.683
N300_04766
Lysine-specific demethylase 6B.
    
 0.676
N300_03967
Lysine-specific demethylase 6A.
    
 0.676
N300_03816
Retinoblastoma-binding protein 5.
    
 0.654
N300_11720
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.651
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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