STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_05684Hepatocyte nuclear factor 3-alpha. (441 aa)    
Predicted Functional Partners:
N300_09654
Estrogen receptor.
    
 0.775
N300_00510
GATA-binding factor 3.
    
 0.771
N300_09892
Androgen receptor.
    
 0.719
N300_10065
GATA-binding factor 2.
    
 0.712
N300_10972
Uncharacterized protein.
    
 0.711
N300_15701
Transcription factor GATA-5.
    
 0.711
N300_01685
Progesterone receptor.
    
 0.685
N300_01652
Estrogen receptor beta.
    
 0.667
N300_08505
Zinc finger transcription factor Trps1.
    
 0.659
N300_11153
Ribosomal protein S6 kinase beta-1; Belongs to the protein kinase superfamily.
     
 0.632
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.