STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_01304E3 ubiquitin-protein ligase NRDP1. (244 aa)    
Predicted Functional Partners:
N300_06936
Baculoviral IAP repeat-containing protein 6.
    
 0.847
N300_06258
Ubiquitin-40S ribosomal protein S27a.
    
 0.776
N300_07790
Ubiquitin-60S ribosomal protein L40.
    
  0.746
N300_03254
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.732
N300_11603
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.709
N300_03535
Polyubiquitin.
    
 0.689
N300_10229
Polyubiquitin-C.
    
 0.689
N300_10019
2'-5'-oligoadenylate synthase-like 2.
    
 0.689
N300_09674
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2.
    
 0.681
N300_03931
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3.
    
 0.681
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.