STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_04125E3 ubiquitin-protein ligase LNX. (665 aa)    
Predicted Functional Partners:
N300_10466
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
    
0.815
N300_01984
MAGUK p55 subfamily member 5; Belongs to the MAGUK family.
    
 0.773
N300_06199
MAGUK p55 subfamily member 3.
    
 0.773
N300_06462
MAGUK p55 subfamily member 7.
    
 0.773
N300_03959
Peripheral plasma membrane protein CASK.
   
 0.771
N300_01699
Angiomotin-like 1.
    
 0.764
N300_07790
Ubiquitin-60S ribosomal protein L40.
    
 0.751
N300_06258
Ubiquitin-40S ribosomal protein S27a.
    
  0.746
N300_09514
Ankyrin repeat domain-containing protein 33.
    
 0.735
N300_02813
Ankyrin repeat domain-containing protein 33B.
    
 0.735
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.