STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_09462Ubiquitin-like 3. (109 aa)    
Predicted Functional Partners:
N300_02014
Ubiquitin-like 5.
      
 0.522
N300_00579
Protein unc-79.
      
 0.505
N300_06996
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.481
N300_08582
Protein FAM150B.
      
 0.481
N300_06682
Small ubiquitin-related modifier.
      
 0.481
N300_15394
Lipoxygenase homology domain-containing protein 1.
      
 0.481
N300_12272
Autophagy-related protein 3.
      
 0.478
N300_12184
BTB/POZ domain-containing protein 9.
      
 0.424
N300_10956
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
      
 0.416
N300_07845
E3 UFM1-protein ligase 1.
      
 0.410
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.