STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N300_02383GON-4-like. (2015 aa)    
Predicted Functional Partners:
N300_13195
Fanconi anemia group M protein.
    
 0.803
N300_15486
U7 snRNA-associated Sm-like LSm10.
    
 0.774
N300_02937
DNA polymerase delta subunit 2.
    
 0.751
N300_03734
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.704
N300_06667
Small nuclear ribonucleoprotein F.
    
  0.686
N300_01514
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.677
N300_09472
Small nuclear ribonucleoprotein G.
    
  0.676
N300_06879
Protein cramped-like.
   
 
 0.667
N300_15807
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.666
N300_10479
Putative ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family.
   
 0.665
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.