STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6Y2F7_ORNANUncharacterized protein. (754 aa)    
Predicted Functional Partners:
GATA1
GATA-type domain-containing protein.
   
 0.941
GATA3
GATA binding protein 3.
    
 0.790
GATA4
Uncharacterized protein.
   
 0.708
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.676
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.676
GATA6
GATA-type domain-containing protein.
   
 0.664
LMO2
LIM domain only 2.
   
 
 0.634
LDB1
LIM domain binding 1.
    
 
 0.619
TAL1
BHLH domain-containing protein.
   
 
 0.602
GATA5
Uncharacterized protein.
   
 0.597
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.