STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional regulating factor 1. (1102 aa)    
Predicted Functional Partners:
F7AIZ0_ORNAN
DNTTIP1_dimer domain-containing protein.
    
 
 0.797
KCTD19
Uncharacterized protein.
      
 0.752
F7GDS6_ORNAN
Uncharacterized protein.
      
 0.752
K7EES6_ORNAN
Uncharacterized protein.
      
 0.752
CCDC51
Uncharacterized protein.
      
 0.607
SNRNP200
Helicase ATP-binding domain-containing protein.
      
 0.603
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
      
 0.600
ZBTB18
Zinc finger and BTB domain containing 18.
    
 
 0.574
APBB2
Uncharacterized protein.
      
 0.567
MBNL1
Muscleblind like splicing regulator 1.
      
 0.567
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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