STRINGSTRING
TRERF1 protein (Ornithorhynchus anatinus) - STRING interaction network
"TRERF1" - Transcriptional regulating factor 1 in Ornithorhynchus anatinus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional regulating factor 1 (1102 aa)    
Predicted Functional Partners:
DNTTIP1
Uncharacterized protein; Deoxynucleotidyltransferase, terminal, interacting protein 1 (151 aa)
       
 
  0.758
ZBTB17
Zinc finger and BTB domain containing 17 (911 aa)
       
 
  0.736
BRPF1
Bromodomain and PHD finger containing, 1 (1140 aa)
           
  0.727
KDM1A
Lysine demethylase 1A (653 aa)
       
 
  0.684
NR5A1
Nuclear receptor subfamily 5, group A, member 1 (385 aa)
     
 
  0.662
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2 (2425 aa)
     
 
  0.633
ARL14
ADP-ribosylation factor-like 14; Belongs to the small GTPase superfamily. Arf family (190 aa)
           
  0.602
KBTBD8
Kelch repeat and BTB (POZ) domain containing 8 (601 aa)
     
   
  0.601
GPR110
G protein-coupled receptor 110; Belongs to the G-protein coupled receptor 2 family (860 aa)
           
  0.597
CCDC51
Coiled-coil domain containing 51 (458 aa)
           
  0.535
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Ornithorhynchus anatinus, duck-billed platypus, duckbill platypus, platypus
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